Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 AL079307.3-201ENST00000556114 283 ntBASIC17.98■□□□□ 0.47
SOX1O00570 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 SRD5A3P1-201ENST00000603021 949 ntBASIC17.98■□□□□ 0.47
SOX1O00570 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.98■□□□□ 0.47
SOX1O00570 AL133215.2-201ENST00000609242 977 ntBASIC17.98■□□□□ 0.47
SOX1O00570 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.98■□□□□ 0.47
SOX1O00570 RPSAP52-203ENST00000622976 1023 ntBASIC17.98■□□□□ 0.47
SOX1O00570 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.98■□□□□ 0.47
SOX1O00570 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SOX1O00570 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 AC007952.6-201ENST00000573168 2673 ntBASIC17.98■□□□□ 0.47
SOX1O00570 AC003957.1-201ENST00000625108 2673 ntBASIC17.98■□□□□ 0.47
SOX1O00570 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.98■□□□□ 0.47
SOX1O00570 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.98■□□□□ 0.47
SOX1O00570 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.97■□□□□ 0.47
SOX1O00570 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SOX1O00570 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.97■□□□□ 0.47
SOX1O00570 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.97■□□□□ 0.47
SOX1O00570 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.97■□□□□ 0.47
SOX1O00570 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.97■□□□□ 0.47
SOX1O00570 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.97■□□□□ 0.47
SOX1O00570 AC114501.2-201ENST00000439631 535 ntBASIC17.97■□□□□ 0.47
SOX1O00570 LDHBP1-201ENST00000455730 1119 ntBASIC17.97■□□□□ 0.47
SOX1O00570 PFN1P12-201ENST00000455938 534 ntBASIC17.97■□□□□ 0.47
SOX1O00570 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.97■□□□□ 0.47
SOX1O00570 RN7SL618P-201ENST00000477850 296 ntBASIC17.97■□□□□ 0.47
SOX1O00570 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.97■□□□□ 0.47
SOX1O00570 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.97■□□□□ 0.47
SOX1O00570 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.97■□□□□ 0.47
SOX1O00570 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SOX1O00570 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX1O00570 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SOX1O00570 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX1O00570 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.96■□□□□ 0.47
SOX1O00570 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 AFG3L1P-217ENST00000557444 2447 ntBASIC17.96■□□□□ 0.47
SOX1O00570 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.96■□□□□ 0.47
SOX1O00570 BTBD6P1-201ENST00000412176 1267 ntBASIC17.96■□□□□ 0.47
SOX1O00570 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.96■□□□□ 0.47
SOX1O00570 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.96■□□□□ 0.47
SOX1O00570 AL589987.1-201ENST00000453380 819 ntBASIC17.96■□□□□ 0.47
SOX1O00570 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.96■□□□□ 0.47
SOX1O00570 MIR4722-201ENST00000578292 60 ntBASIC17.96■□□□□ 0.47
SOX1O00570 AC073389.1-201ENST00000595595 795 ntBASIC17.96■□□□□ 0.47
SOX1O00570 AC010319.3-201ENST00000597028 470 ntBASIC17.96■□□□□ 0.47
SOX1O00570 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SOX1O00570 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX1O00570 AL033527.5-201ENST00000641382 801 ntBASIC17.96■□□□□ 0.47
SOX1O00570 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX1O00570 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX1O00570 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.96■□□□□ 0.46
SOX1O00570 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SOX1O00570 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SOX1O00570 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 HLA-H-201ENST00000383620 1096 ntBASIC17.95■□□□□ 0.46
SOX1O00570 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.95■□□□□ 0.46
SOX1O00570 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.95■□□□□ 0.46
SOX1O00570 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms