Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN5O00501 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN5O00501 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN5O00501 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN5O00501 AC060834.1-201ENST00000443027 2032 ntBASIC17.98■□□□□ 0.47
CLDN5O00501 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN5O00501 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN5O00501 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN5O00501 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLDN5O00501 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN5O00501 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CLDN5O00501 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.97■□□□□ 0.47
CLDN5O00501 AC004832.2-201ENST00000426397 482 ntBASIC17.97■□□□□ 0.47
CLDN5O00501 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN5O00501 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN5O00501 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN5O00501 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN5O00501 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLDN5O00501 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN5O00501 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CLDN5O00501 AC010327.4-202ENST00000591484 748 ntBASIC17.97■□□□□ 0.47
CLDN5O00501 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN5O00501 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLDN5O00501 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN5O00501 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN5O00501 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN5O00501 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN5O00501 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN5O00501 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN5O00501 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN5O00501 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN5O00501 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CLDN5O00501 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN5O00501 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN5O00501 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN5O00501 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN5O00501 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN5O00501 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN5O00501 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN5O00501 AC023141.13-201ENST00000604991 943 ntBASIC17.96■□□□□ 0.47
CLDN5O00501 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN5O00501 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
CLDN5O00501 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN5O00501 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLDN5O00501 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN5O00501 AP001094.4-201ENST00000579008 2176 ntBASIC17.96■□□□□ 0.46
CLDN5O00501 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN5O00501 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CLDN5O00501 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN5O00501 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN5O00501 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN5O00501 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CLDN5O00501 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms