Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC092919.2-201ENST00000623631 1645 ntBASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC012569.1-201ENST00000591191 1524 ntBASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 TOP3BP1-201ENST00000420768 1380 ntBASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AL021920.2-201ENST00000624828 1351 ntBASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 HCG4-201ENST00000418983 998 ntBASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC140658.5-201ENST00000438532 169 ntBASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AP000344.2-201ENST00000512987 629 ntBASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC091167.2-201ENST00000579581 588 ntBASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC068880.1-201ENST00000507289 2297 ntBASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 AP001350.2-201ENST00000625104 1094 ntBASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.03■□□□□ 0.32
C1QTNF3-AMACRE9PGA6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms