Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 MIR564-202ENST00000385049 94 ntBASIC14.87□□□□□ -0.03
HMX3A6NHT5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 NUDT16P1-203ENST00000513809 620 ntBASIC14.87□□□□□ -0.03
HMX3A6NHT5 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 AL049637.2-201ENST00000641778 930 ntBASIC14.87□□□□□ -0.03
HMX3A6NHT5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 NORAD-201ENST00000565493 5339 ntBASIC14.87□□□□□ -0.03
HMX3A6NHT5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMX3A6NHT5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.87□□□□□ -0.03
HMX3A6NHT5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AC013268.4-201ENST00000637413 2228 ntBASIC14.86□□□□□ -0.03
HMX3A6NHT5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AC012618.2-201ENST00000428058 849 ntBASIC14.86□□□□□ -0.03
HMX3A6NHT5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AC233702.5-201ENST00000584107 538 ntBASIC14.86□□□□□ -0.03
HMX3A6NHT5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 Z99916.2-201ENST00000604037 246 ntBASIC14.86□□□□□ -0.03
HMX3A6NHT5 AP001412.1-201ENST00000608405 714 ntBASIC14.86□□□□□ -0.03
HMX3A6NHT5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AL163051.1-201ENST00000569214 1512 ntBASIC14.86□□□□□ -0.03
HMX3A6NHT5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 AC104581.4-201ENST00000623126 3052 ntBASIC14.86□□□□□ -0.03
HMX3A6NHT5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.86□□□□□ -0.03
HMX3A6NHT5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMX3A6NHT5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC006538.1-201ENST00000567905 1585 ntBASIC14.85□□□□□ -0.03
HMX3A6NHT5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 MFAP1P1-201ENST00000442257 1255 ntBASIC14.85□□□□□ -0.03
HMX3A6NHT5 AL355355.2-201ENST00000442321 338 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms