Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.58■□□□□ 0.57
CCDC66A2RUB6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 AC211429.1-201ENST00000415277 523 ntBASIC18.58■□□□□ 0.56
CCDC66A2RUB6 TSPY12P-201ENST00000421279 868 ntBASIC18.58■□□□□ 0.56
CCDC66A2RUB6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 AC112698.1-201ENST00000510299 916 ntBASIC18.58■□□□□ 0.56
CCDC66A2RUB6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC66A2RUB6 DBET-201ENST00000630918 3363 ntBASIC18.58■□□□□ 0.56
CCDC66A2RUB6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 AL513523.2-202ENST00000427283 2040 ntBASIC18.57■□□□□ 0.56
CCDC66A2RUB6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.57■□□□□ 0.56
CCDC66A2RUB6 AC005104.2-201ENST00000427818 678 ntBASIC18.57■□□□□ 0.56
CCDC66A2RUB6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 COX11P1-201ENST00000489116 835 ntBASIC18.57■□□□□ 0.56
CCDC66A2RUB6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC66A2RUB6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 LIN28AP1-201ENST00000429574 405 ntBASIC18.56■□□□□ 0.56
CCDC66A2RUB6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 AL441883.1-201ENST00000566170 1045 ntBASIC18.56■□□□□ 0.56
CCDC66A2RUB6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms