Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV5A0A0B4J249 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV5A0A0B4J249 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV5A0A0B4J249 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV5A0A0B4J249 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 ATP5G1P1-201ENST00000448724 379 ntBASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 AL359075.1-203ENST00000462729 1002 ntBASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 PAUPAR-201ENST00000630360 2965 ntBASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV5A0A0B4J249 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 LINC00554-201ENST00000564841 3011 ntBASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 TSPY26P-202ENST00000565928 3884 ntBASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms