Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 AC074051.2-201ENST00000565115 352 ntBASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 AC092329.2-201ENST00000598402 547 ntBASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 AC026691.1-201ENST00000602502 2017 ntBASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA3Q9Y5H8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 AC097637.2-201ENST00000624096 1997 ntBASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 AP002414.1-201ENST00000391405 1147 ntBASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 ABCD1P5-201ENST00000445663 754 ntBASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 AC073592.4-201ENST00000623827 446 ntBASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 CICP6-201ENST00000457191 2729 ntBASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA3Q9Y5H8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA3Q9Y5H8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA3Q9Y5H8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms