Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB6Q9Y5F9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB6Q9Y5F9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB6Q9Y5F9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB6Q9Y5F9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB6Q9Y5F9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB6Q9Y5F9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 HNRNPDP1-201ENST00000439535 754 ntBASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB6Q9Y5F9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 AL596257.1-201ENST00000641463 2694 ntBASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 OR7E14P-202ENST00000530490 1290 ntBASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 AC145285.3-201ENST00000564603 959 ntBASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 AC073592.4-201ENST00000623827 446 ntBASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 AC116407.3-201ENST00000623905 1129 ntBASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 ZNF259P1-201ENST00000407656 1365 ntBASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 HLA-J-201ENST00000462773 1622 ntBASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
PCDHGB6Q9Y5F9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms