Protein–RNA interactions for Protein: Q9Y4B6

DCAF1, DDB1- and CUL4-associated factor 1, humanhuman

Predictions only

Length 1,507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF1Q9Y4B6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 KRT17P7-201ENST00000451704 1104 ntBASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 GPR53P-205ENST00000457298 1084 ntBASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 AC105021.1-202ENST00000570572 669 ntBASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC32.18■■■□□ 2.74
DCAF1Q9Y4B6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AL353779.1-201ENST00000434793 351 ntBASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 GIMAP3P-201ENST00000495150 836 ntBASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 SNX33P1-201ENST00000592116 1762 ntBASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AC138969.3-201ENST00000546612 1459 ntBASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AC138932.2-201ENST00000548268 1459 ntBASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 AC126755.4-201ENST00000549796 1459 ntBASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
DCAF1Q9Y4B6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 SPDYE18-201ENST00000510091 1050 ntBASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 SPTSSB-204ENST00000617024 1292 ntBASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 AC098614.1-201ENST00000368528 745 ntBASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 IGHV3-71-201ENST00000523324 359 ntBASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 AC106886.1-201ENST00000568660 600 ntBASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC32.16■■■□□ 2.74
DCAF1Q9Y4B6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
DCAF1Q9Y4B6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC32.14■■■□□ 2.74
DCAF1Q9Y4B6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC32.14■■■□□ 2.73
DCAF1Q9Y4B6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
DCAF1Q9Y4B6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
DCAF1Q9Y4B6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC32.13■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms