Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 AL157888.1-201ENST00000631930 593 ntBASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 AC022188.1-201ENST00000620960 1664 ntBASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 C8orf49-201ENST00000525043 1968 ntBASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 MIR935-201ENST00000401179 91 ntBASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 AP003071.4-201ENST00000562276 1284 ntBASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 AC233702.5-201ENST00000584107 538 ntBASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.35□□□□□ -0.11
KCNIP3Q9Y2W7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 AL161772.1-201ENST00000610494 4412 ntBASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms