Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 LAGE3P1-201ENST00000425356 484 ntBASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AC092910.1-201ENST00000482027 1129 ntBASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 SLC25A1P1-201ENST00000528351 927 ntBASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AC012640.2-201ENST00000561606 901 ntBASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AC139887.3-201ENST00000568585 713 ntBASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 PP12613-201ENST00000424958 2230 ntBASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 NCF1C-201ENST00000438382 1427 ntBASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 AC243591.1-201ENST00000452967 1364 ntBASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 AL023806.1-201ENST00000603994 1649 ntBASIC15.72■□□□□ 0.11
RPH3AQ9Y2J0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 AP002414.3-201ENST00000589352 1468 ntBASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 AC141586.5-201ENST00000624546 2050 ntBASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.71■□□□□ 0.11
RPH3AQ9Y2J0 LINC00982-205ENST00000420957 435 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms