Protein–RNA interactions for Protein: Q9Y287

ITM2B, Integral membrane protein 2B, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2BQ9Y287 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.27■□□□□ 0.36
ITM2BQ9Y287 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ITM2BQ9Y287 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.27■□□□□ 0.36
ITM2BQ9Y287 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 PI4KAP1-204ENST00000612579 1703 ntBASIC17.27■□□□□ 0.35
ITM2BQ9Y287 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.27■□□□□ 0.35
ITM2BQ9Y287 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 FLJ16779-201ENST00000612722 7638 ntBASIC17.26■□□□□ 0.35
ITM2BQ9Y287 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 AP002414.1-201ENST00000391405 1147 ntBASIC17.26■□□□□ 0.35
ITM2BQ9Y287 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 FER1L4-210ENST00000615531 5998 ntBASIC17.26■□□□□ 0.35
ITM2BQ9Y287 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ITM2BQ9Y287 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 TNRC18P3-201ENST00000441896 2691 ntBASIC17.25■□□□□ 0.35
ITM2BQ9Y287 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 KRT18P13-201ENST00000400056 1290 ntBASIC17.25■□□□□ 0.35
ITM2BQ9Y287 AC023274.1-201ENST00000418278 595 ntBASIC17.25■□□□□ 0.35
ITM2BQ9Y287 BX842568.4-201ENST00000421222 227 ntBASIC17.25■□□□□ 0.35
ITM2BQ9Y287 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 AC018845.2-201ENST00000568326 409 ntBASIC17.25■□□□□ 0.35
ITM2BQ9Y287 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITM2BQ9Y287 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 CRYGEP-201ENST00000412192 528 ntBASIC17.24■□□□□ 0.35
ITM2BQ9Y287 IGLL3P-201ENST00000412472 434 ntBASIC17.24■□□□□ 0.35
ITM2BQ9Y287 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 VN2R19P-201ENST00000442399 1052 ntBASIC17.24■□□□□ 0.35
ITM2BQ9Y287 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 OR7E47P-204ENST00000575924 449 ntBASIC17.24■□□□□ 0.35
ITM2BQ9Y287 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.24■□□□□ 0.35
ITM2BQ9Y287 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms