Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 AL049757.1-201ENST00000616842 1596 ntBASIC19.65■□□□□ 0.74
USP25Q9UHP3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.64■□□□□ 0.74
USP25Q9UHP3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP25Q9UHP3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
USP25Q9UHP3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.64■□□□□ 0.74
USP25Q9UHP3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP25Q9UHP3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP25Q9UHP3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP25Q9UHP3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
USP25Q9UHP3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP25Q9UHP3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.64■□□□□ 0.74
USP25Q9UHP3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 PAUPAR-201ENST00000630360 2965 ntBASIC19.64■□□□□ 0.73
USP25Q9UHP3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 SLC25A1P3-201ENST00000395415 828 ntBASIC19.64■□□□□ 0.73
USP25Q9UHP3 AL031133.1-201ENST00000406807 723 ntBASIC19.64■□□□□ 0.73
USP25Q9UHP3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 AC009533.2-201ENST00000543664 586 ntBASIC19.64■□□□□ 0.73
USP25Q9UHP3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.64■□□□□ 0.73
USP25Q9UHP3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP25Q9UHP3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 VENTXP7-201ENST00000475503 772 ntBASIC19.63■□□□□ 0.73
USP25Q9UHP3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USP25Q9UHP3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms