Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 HTR5BP-201ENST00000430851 1154 ntBASIC15.69■□□□□ 0.1
LRFN1Q9P244 MKNK2P1-201ENST00000437526 628 ntBASIC15.69■□□□□ 0.1
LRFN1Q9P244 FAM185BP-201ENST00000443595 716 ntBASIC15.69■□□□□ 0.1
LRFN1Q9P244 AC074386.1-202ENST00000463561 864 ntBASIC15.69■□□□□ 0.1
LRFN1Q9P244 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 MIR4469-201ENST00000583919 79 ntBASIC15.69■□□□□ 0.1
LRFN1Q9P244 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 AL078644.1-201ENST00000609881 752 ntBASIC15.69■□□□□ 0.1
LRFN1Q9P244 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRFN1Q9P244 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 DNAJB3-202ENST00000449667 1266 ntBASIC15.68■□□□□ 0.1
LRFN1Q9P244 AL513480.1-201ENST00000451731 511 ntBASIC15.68■□□□□ 0.1
LRFN1Q9P244 SLC25A6P2-201ENST00000497974 877 ntBASIC15.68■□□□□ 0.1
LRFN1Q9P244 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRFN1Q9P244 AC134043.2-201ENST00000624206 2238 ntBASIC15.68■□□□□ 0.1
LRFN1Q9P244 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.68■□□□□ 0.1
LRFN1Q9P244 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 YBX1P5-201ENST00000509441 847 ntBASIC15.67■□□□□ 0.1
LRFN1Q9P244 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRFN1Q9P244 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
LRFN1Q9P244 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms