Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 BX664615.1-201ENST00000443558 458 ntBASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.92□□□□□ -0.18
CTNNBIP1Q9NSA3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 GUSBP12-201ENST00000513727 720 ntBASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 GPR89P-201ENST00000407924 1495 ntBASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 AL049757.1-201ENST00000616842 1596 ntBASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNNBIP1Q9NSA3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 Z83836.1-201ENST00000624605 1642 ntBASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 HBZP1-201ENST00000354915 429 ntBASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 STK25P1-201ENST00000585406 838 ntBASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNNBIP1Q9NSA3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms