Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.65□□□□□ -0.06
GCM1Q9NP62 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.07
GCM1Q9NP62 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
GCM1Q9NP62 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 AC106820.2-201ENST00000563775 3264 ntBASIC14.64□□□□□ -0.07
GCM1Q9NP62 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 ACTG1P4-201ENST00000425123 1122 ntBASIC14.64□□□□□ -0.07
GCM1Q9NP62 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 RNA5SP419-201ENST00000515908 135 ntBASIC14.64□□□□□ -0.07
GCM1Q9NP62 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 FAM215A-202ENST00000632077 792 ntBASIC14.64□□□□□ -0.07
GCM1Q9NP62 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 AC016396.2-201ENST00000562575 1417 ntBASIC14.64□□□□□ -0.07
GCM1Q9NP62 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
GCM1Q9NP62 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GCM1Q9NP62 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 LINC00982-205ENST00000420957 435 ntBASIC14.63□□□□□ -0.07
GCM1Q9NP62 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 AC093909.1-201ENST00000504731 1122 ntBASIC14.63□□□□□ -0.07
GCM1Q9NP62 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 AC006557.2-201ENST00000592985 1240 ntBASIC14.63□□□□□ -0.07
GCM1Q9NP62 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 AC008735.5-201ENST00000623544 497 ntBASIC14.63□□□□□ -0.07
GCM1Q9NP62 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
GCM1Q9NP62 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GCM1Q9NP62 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms