Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AL590787.1-201ENST00000568856 1315 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AL355306.1-201ENST00000415580 579 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AC107890.1-201ENST00000422478 521 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AL592309.1-201ENST00000443127 649 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 KRT8P48-201ENST00000515599 1220 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AL358472.5-202ENST00000641448 1267 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 REXO1L9P-201ENST00000604264 2108 ntBASIC19.88■□□□□ 0.77
EFCC1Q9HA90 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.88■□□□□ 0.77
EFCC1Q9HA90 AC020763.4-201ENST00000623414 4170 ntBASIC19.87■□□□□ 0.77
EFCC1Q9HA90 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 CR383656.12-201ENST00000549567 513 ntBASIC19.87■□□□□ 0.77
EFCC1Q9HA90 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 AP001059.3-201ENST00000619053 235 ntBASIC19.87■□□□□ 0.77
EFCC1Q9HA90 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EFCC1Q9HA90 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 KRT18P32-201ENST00000424695 1287 ntBASIC19.86■□□□□ 0.77
EFCC1Q9HA90 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 SLC25A39P2-201ENST00000537614 270 ntBASIC19.86■□□□□ 0.77
EFCC1Q9HA90 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 AC027307.3-201ENST00000594262 1100 ntBASIC19.86■□□□□ 0.77
EFCC1Q9HA90 MIR6752-201ENST00000618442 71 ntBASIC19.86■□□□□ 0.77
EFCC1Q9HA90 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
EFCC1Q9HA90 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms