Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 AC021087.4-201ENST00000563761 564 ntBASIC15.28■□□□□ 0.04
NELFAQ9H3P2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 LINC02012-201ENST00000608206 1725 ntBASIC15.27■□□□□ 0.04
NELFAQ9H3P2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 SIGLEC30P-201ENST00000455569 941 ntBASIC15.27■□□□□ 0.04
NELFAQ9H3P2 AC018712.1-201ENST00000455767 687 ntBASIC15.27■□□□□ 0.04
NELFAQ9H3P2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 AC009078.2-202ENST00000463353 338 ntBASIC15.27■□□□□ 0.04
NELFAQ9H3P2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.27■□□□□ 0.04
NELFAQ9H3P2 AC025062.2-201ENST00000605477 670 ntBASIC15.27■□□□□ 0.04
NELFAQ9H3P2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NELFAQ9H3P2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SLC25A1P3-201ENST00000395415 828 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 MRPL3P1-201ENST00000400109 1033 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 FAM197Y8-203ENST00000450145 560 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 PRYP5-201ENST00000451909 266 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SCARNA2-201ENST00000458748 420 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.26■□□□□ 0.03
NELFAQ9H3P2 SLC25A6P4-201ENST00000586535 553 ntBASIC15.26■□□□□ 0.03
NELFAQ9H3P2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms