Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 MIR663B-201ENST00000408361 115 ntBASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 KLF4P1-201ENST00000412782 1185 ntBASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 AC005332.8-201ENST00000622750 2735 ntBASIC16.25■□□□□ 0.19
CNTNAP3Q9BZ76 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 SDHAP2-201ENST00000455183 2001 ntBASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNTNAP3Q9BZ76 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 SIRPAP1-201ENST00000448467 1770 ntBASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 BRWD1P1-201ENST00000401091 371 ntBASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 WASH4P-201ENST00000564273 1246 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms