Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AC079602.3-201ENST00000623931 403 ntBASIC10.26□□□□□ -0.77
LIMD2Q9BT23 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC099063.4-201ENST00000641099 1602 ntBASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 TBC1D3P5-201ENST00000579401 1545 ntBASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 MYCLP1-201ENST00000372451 1075 ntBASIC10.25□□□□□ -0.77
LIMD2Q9BT23 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 TMPOP1-202ENST00000424642 1267 ntBASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 LY6E-213ENST00000522528 606 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 LTBR-211ENST00000543190 785 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AC006011.2-201ENST00000621313 1158 ntBASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 AL138688.1-201ENST00000624851 1594 ntBASIC10.25□□□□□ -0.77
LIMD2Q9BT23 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LIMD2Q9BT23 DOC2GP-204ENST00000639052 2548 ntBASIC10.25□□□□□ -0.77
LIMD2Q9BT23 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.24□□□□□ -0.77
LIMD2Q9BT23 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms