Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 AL023806.1-201ENST00000603994 1649 ntBASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 AC091167.2-201ENST00000579581 588 ntBASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 AC092865.6-201ENST00000642101 219 ntBASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 FRMD8P1-201ENST00000440433 1524 ntBASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 AL353732.1-201ENST00000569618 1459 ntBASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 AL513190.1-201ENST00000621254 727 ntBASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 C20orf181-201ENST00000623918 480 ntBASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP1Q96SZ6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 RPSAP43-201ENST00000402237 625 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 HCG4-201ENST00000418983 998 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 MKNK2P1-201ENST00000437526 628 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 AL031432.2-201ENST00000566714 459 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 AL928711.1-201ENST00000570165 459 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 MIR4515-201ENST00000584082 81 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 AC010327.4-202ENST00000591484 748 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 TUBB8P12-201ENST00000308911 1335 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 TUBB7P-202ENST00000428444 1305 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 TUBB8P7-204ENST00000567960 1332 ntBASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDK5RAP1Q96SZ6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms