Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13□□□□□ -0.33
AP1S3Q96PC3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 LINC00304-203ENST00000565008 1864 ntBASIC13□□□□□ -0.33
AP1S3Q96PC3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13□□□□□ -0.33
AP1S3Q96PC3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13□□□□□ -0.33
AP1S3Q96PC3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC116562.2-201ENST00000507042 360 ntBASIC13□□□□□ -0.33
AP1S3Q96PC3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13□□□□□ -0.33
AP1S3Q96PC3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC104390.1-201ENST00000555663 520 ntBASIC13□□□□□ -0.33
AP1S3Q96PC3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13□□□□□ -0.33
AP1S3Q96PC3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
AP1S3Q96PC3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13□□□□□ -0.33
AP1S3Q96PC3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
AP1S3Q96PC3 AC100803.2-201ENST00000562459 1963 ntBASIC13□□□□□ -0.33
AP1S3Q96PC3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP1S3Q96PC3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms