Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 RNU1-129P-201ENST00000384064 167 ntBASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 MRPS18AP1-201ENST00000414458 589 ntBASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 U1.21-201ENST00000580816 167 ntBASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 AL590560.3-201ENST00000623350 461 ntBASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NECTIN4Q96NY8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 WIZP1-201ENST00000531444 2299 ntBASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 CU639417.3-201ENST00000624240 1404 ntBASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 HLA-V-201ENST00000429037 534 ntBASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 KRT17P7-201ENST00000451704 1104 ntBASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 AC091167.2-201ENST00000579581 588 ntBASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 AC106820.2-201ENST00000563775 3264 ntBASIC17.59■□□□□ 0.41
NECTIN4Q96NY8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 AC022144.1-201ENST00000602255 1580 ntBASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN4Q96NY8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 AP001350.2-201ENST00000625104 1094 ntBASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.58■□□□□ 0.4
NECTIN4Q96NY8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN4Q96NY8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN4Q96NY8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN4Q96NY8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NECTIN4Q96NY8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms