Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 PCDHB17P-201ENST00000539533 2393 ntBASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 AL589182.2-201ENST00000619332 1049 ntBASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDF1Q96CC6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 AC018695.7-201ENST00000624587 2492 ntBASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RHBDF1Q96CC6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 SAPCD2P3-201ENST00000455031 850 ntBASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 TUBB7P-202ENST00000428444 1305 ntBASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 TUBB8P7-204ENST00000567960 1332 ntBASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 UBALD1-205ENST00000590891 2641 ntBASIC16.64■□□□□ 0.25
RHBDF1Q96CC6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDF1Q96CC6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms