Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.94■□□□□ 0.62
HPS3Q969F9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.94■□□□□ 0.62
HPS3Q969F9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.94■□□□□ 0.62
HPS3Q969F9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.94■□□□□ 0.62
HPS3Q969F9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.94■□□□□ 0.62
HPS3Q969F9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HPS3Q969F9 AL139424.1-201ENST00000607572 797 ntBASIC18.94■□□□□ 0.62
HPS3Q969F9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.94■□□□□ 0.62
HPS3Q969F9 AL589182.2-201ENST00000619332 1049 ntBASIC18.94■□□□□ 0.62
HPS3Q969F9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS3Q969F9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.94■□□□□ 0.62
HPS3Q969F9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HPS3Q969F9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS3Q969F9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS3Q969F9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS3Q969F9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS3Q969F9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
HPS3Q969F9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS3Q969F9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HPS3Q969F9 AC243591.1-201ENST00000452967 1364 ntBASIC18.93■□□□□ 0.62
HPS3Q969F9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
HPS3Q969F9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HPS3Q969F9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.93■□□□□ 0.62
HPS3Q969F9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HPS3Q969F9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.93■□□□□ 0.62
HPS3Q969F9 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.93■□□□□ 0.62
HPS3Q969F9 ELK2BP-201ENST00000415014 1224 ntBASIC18.93■□□□□ 0.62
HPS3Q969F9 AL450487.1-201ENST00000426799 995 ntBASIC18.93■□□□□ 0.62
HPS3Q969F9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.93■□□□□ 0.62
HPS3Q969F9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.93■□□□□ 0.62
HPS3Q969F9 SCARNA2-201ENST00000458748 420 ntBASIC18.93■□□□□ 0.62
HPS3Q969F9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HPS3Q969F9 AL031008.1-201ENST00000619963 541 ntBASIC18.93■□□□□ 0.62
HPS3Q969F9 AC004706.3-202ENST00000621574 984 ntBASIC18.93■□□□□ 0.62
HPS3Q969F9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
HPS3Q969F9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HPS3Q969F9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HPS3Q969F9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS3Q969F9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HPS3Q969F9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HPS3Q969F9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.92■□□□□ 0.62
HPS3Q969F9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HPS3Q969F9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HPS3Q969F9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.92■□□□□ 0.62
HPS3Q969F9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 AP002414.1-201ENST00000391405 1147 ntBASIC18.92■□□□□ 0.62
HPS3Q969F9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.92■□□□□ 0.62
HPS3Q969F9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.92■□□□□ 0.62
HPS3Q969F9 FAM197Y8-203ENST00000450145 560 ntBASIC18.92■□□□□ 0.62
HPS3Q969F9 RNPS1P1-201ENST00000507437 918 ntBASIC18.92■□□□□ 0.62
HPS3Q969F9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.92■□□□□ 0.62
HPS3Q969F9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.92■□□□□ 0.62
HPS3Q969F9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.92■□□□□ 0.62
HPS3Q969F9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.92■□□□□ 0.62
HPS3Q969F9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.92■□□□□ 0.62
HPS3Q969F9 AC139887.3-201ENST00000568585 713 ntBASIC18.92■□□□□ 0.62
HPS3Q969F9 AL121912.1-201ENST00000603683 238 ntBASIC18.92■□□□□ 0.62
HPS3Q969F9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.92■□□□□ 0.62
HPS3Q969F9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.92■□□□□ 0.62
HPS3Q969F9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 AL645728.1-201ENST00000366221 2101 ntBASIC18.92■□□□□ 0.62
HPS3Q969F9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.92■□□□□ 0.62
HPS3Q969F9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS3Q969F9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HPS3Q969F9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HPS3Q969F9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HPS3Q969F9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS3Q969F9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS3Q969F9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms