Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATP2A3Q93084 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A3Q93084 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A3Q93084 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A3Q93084 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A3Q93084 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A3Q93084 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A3Q93084 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A3Q93084 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A3Q93084 AL023806.1-201ENST00000603994 1649 ntBASIC18.05■□□□□ 0.48
ATP2A3Q93084 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A3Q93084 AC009949.1-201ENST00000623048 1830 ntBASIC18.05■□□□□ 0.48
ATP2A3Q93084 PP12613-201ENST00000424958 2230 ntBASIC18.04■□□□□ 0.48
ATP2A3Q93084 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 STK19B-204ENST00000512515 211 ntBASIC18.04■□□□□ 0.48
ATP2A3Q93084 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 AC108860.2-201ENST00000562760 2183 ntBASIC18.04■□□□□ 0.48
ATP2A3Q93084 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A3Q93084 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 AC006504.4-201ENST00000592118 1568 ntBASIC18.04■□□□□ 0.48
ATP2A3Q93084 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A3Q93084 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 STK25P1-201ENST00000585406 838 ntBASIC18.03■□□□□ 0.48
ATP2A3Q93084 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms