Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 AL049840.3-201ENST00000602669 611 ntBASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 UBALD1-205ENST00000590891 2641 ntBASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM3Q8TF72 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
SHROOM3Q8TF72 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SHROOM3Q8TF72 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.39■□□□□ 0.38
SHROOM3Q8TF72 AC106886.4-201ENST00000623557 2502 ntBASIC17.39■□□□□ 0.38
SHROOM3Q8TF72 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHROOM3Q8TF72 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 RPSAP43-201ENST00000402237 625 ntBASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 RPS15P9-201ENST00000494093 319 ntBASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 AC105339.3-201ENST00000560043 636 ntBASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM3Q8TF72 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 TUBB8P12-201ENST00000308911 1335 ntBASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 TUBB7P-202ENST00000428444 1305 ntBASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 TUBB8P7-204ENST00000567960 1332 ntBASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 MRPL20P1-201ENST00000400819 433 ntBASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 AC004706.3-202ENST00000621574 984 ntBASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 AC002310.6-201ENST00000624451 1377 ntBASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM3Q8TF72 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 AGGF1P2-201ENST00000426656 2106 ntBASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 AC007967.2-201ENST00000432613 625 ntBASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.37■□□□□ 0.37
SHROOM3Q8TF72 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms