Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AC087499.1-201ENST00000418141 1075 ntBASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 MTCL1P1-201ENST00000446207 792 ntBASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AL136038.4-201ENST00000603606 1261 ntBASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AC133561.5-201ENST00000635547 218 ntBASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 AL391807.1-203ENST00000604392 2365 ntBASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IL1Q8TBN0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 IGHV3-52-201ENST00000519770 353 ntBASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IL1Q8TBN0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 AP002490.2-201ENST00000524791 560 ntBASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms