Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 KLF4P1-201ENST00000412782 1185 ntBASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 Z69720.1-201ENST00000601483 472 ntBASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS37AQ8NEZ2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 AD001527.2-201ENST00000622994 785 ntBASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 AC092068.3-201ENST00000587894 2016 ntBASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS37AQ8NEZ2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VPS37AQ8NEZ2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 AL031133.1-201ENST00000406807 723 ntBASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 MINOS1P3-201ENST00000457048 203 ntBASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 AP002490.2-201ENST00000524791 560 ntBASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS37AQ8NEZ2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms