Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 RPS2P1-201ENST00000434010 821 ntBASIC14.99□□□□□ -0.01
CPEB3Q8NE35 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AC139887.3-201ENST00000568585 713 ntBASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.99□□□□□ -0.01
CPEB3Q8NE35 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AL353135.1-201ENST00000606729 504 ntBASIC14.99□□□□□ -0.01
CPEB3Q8NE35 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 AC060834.1-201ENST00000443027 2032 ntBASIC14.99□□□□□ -0.01
CPEB3Q8NE35 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPEB3Q8NE35 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 HNRNPDP1-201ENST00000439535 754 ntBASIC14.98□□□□□ -0.01
CPEB3Q8NE35 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 AC073648.2-201ENST00000510116 352 ntBASIC14.98□□□□□ -0.01
CPEB3Q8NE35 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 AL160237.2-201ENST00000556165 472 ntBASIC14.98□□□□□ -0.01
CPEB3Q8NE35 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 AC148477.8-201ENST00000624298 468 ntBASIC14.98□□□□□ -0.01
CPEB3Q8NE35 AC107918.4-202ENST00000641623 219 ntBASIC14.98□□□□□ -0.01
CPEB3Q8NE35 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
CPEB3Q8NE35 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 AL590787.1-201ENST00000568856 1315 ntBASIC14.97□□□□□ -0.01
CPEB3Q8NE35 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 AC022211.2-201ENST00000585075 2527 ntBASIC14.97□□□□□ -0.01
CPEB3Q8NE35 GPR89P-201ENST00000407924 1495 ntBASIC14.97□□□□□ -0.01
CPEB3Q8NE35 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 AC018712.1-201ENST00000455767 687 ntBASIC14.97□□□□□ -0.01
CPEB3Q8NE35 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 AP002469.2-201ENST00000531724 424 ntBASIC14.97□□□□□ -0.01
CPEB3Q8NE35 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 AL139424.1-201ENST00000607572 797 ntBASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms