Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 SAPCD2P3-201ENST00000455031 850 ntBASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 AC064862.7-201ENST00000604520 867 ntBASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIMC1Q8NDZ2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 RBM17P3-201ENST00000417687 1192 ntBASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AC079781.3-201ENST00000449110 356 ntBASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 RN7SL510P-201ENST00000581311 263 ntBASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 TP73-AS1-207ENST00000624167 988 ntBASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms