Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 HLA-DQB2-229ENST00000411527 1059 ntBASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 RRP7BP-205ENST00000566851 833 ntBASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 EGFEM1P-202ENST00000431685 1563 ntBASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
HMCN2Q8NDA2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 HNRNPA1P32-201ENST00000396326 963 ntBASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 SCARNA20.5-201ENST00000516991 142 ntBASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 FAM220BP-201ENST00000377689 816 ntBASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 SPTLC1P5-201ENST00000450718 252 ntBASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 AL512361.1-201ENST00000554200 418 ntBASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 FTLP10-202ENST00000505798 471 ntBASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 AC073352.2-201ENST00000609385 439 ntBASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
HMCN2Q8NDA2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 MSTO2P-201ENST00000314835 1709 ntBASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 PPOX-204ENST00000462866 473 ntTSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 AP001505.2-201ENST00000616815 443 ntBASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HMCN2Q8NDA2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms