Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SCML4Q8N228 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 MCCD1P2-201ENST00000423228 335 ntBASIC17.7■□□□□ 0.42
SCML4Q8N228 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.7■□□□□ 0.42
SCML4Q8N228 AL513480.1-201ENST00000451731 511 ntBASIC17.7■□□□□ 0.42
SCML4Q8N228 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.7■□□□□ 0.42
SCML4Q8N228 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.7■□□□□ 0.42
SCML4Q8N228 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.7■□□□□ 0.42
SCML4Q8N228 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.7■□□□□ 0.42
SCML4Q8N228 AL031432.2-201ENST00000566714 459 ntBASIC17.7■□□□□ 0.42
SCML4Q8N228 AC018845.2-201ENST00000568326 409 ntBASIC17.7■□□□□ 0.42
SCML4Q8N228 AC002347.1-201ENST00000569543 541 ntBASIC17.7■□□□□ 0.42
SCML4Q8N228 AL928711.1-201ENST00000570165 459 ntBASIC17.7■□□□□ 0.42
SCML4Q8N228 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.7■□□□□ 0.42
SCML4Q8N228 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.7■□□□□ 0.42
SCML4Q8N228 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.7■□□□□ 0.42
SCML4Q8N228 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 AC092068.3-201ENST00000587894 2016 ntBASIC17.7■□□□□ 0.42
SCML4Q8N228 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.7■□□□□ 0.42
SCML4Q8N228 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCML4Q8N228 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
SCML4Q8N228 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCML4Q8N228 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCML4Q8N228 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.69■□□□□ 0.42
SCML4Q8N228 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.69■□□□□ 0.42
SCML4Q8N228 MIR940-201ENST00000401276 94 ntBASIC17.69■□□□□ 0.42
SCML4Q8N228 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.69■□□□□ 0.42
SCML4Q8N228 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.69■□□□□ 0.42
SCML4Q8N228 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.69■□□□□ 0.42
SCML4Q8N228 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.69■□□□□ 0.42
SCML4Q8N228 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.69■□□□□ 0.42
SCML4Q8N228 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.69■□□□□ 0.42
SCML4Q8N228 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.69■□□□□ 0.42
SCML4Q8N228 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
SCML4Q8N228 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.69■□□□□ 0.42
SCML4Q8N228 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 AC131009.4-201ENST00000624048 1740 ntBASIC17.69■□□□□ 0.42
SCML4Q8N228 BCAR1-209ENST00000546196 1340 ntBASIC17.69■□□□□ 0.42
SCML4Q8N228 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCML4Q8N228 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
SCML4Q8N228 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCML4Q8N228 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCML4Q8N228 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SCML4Q8N228 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.68■□□□□ 0.42
SCML4Q8N228 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.68■□□□□ 0.42
SCML4Q8N228 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.68■□□□□ 0.42
SCML4Q8N228 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.68■□□□□ 0.42
SCML4Q8N228 AC087641.1-201ENST00000557561 1021 ntBASIC17.68■□□□□ 0.42
SCML4Q8N228 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.68■□□□□ 0.42
SCML4Q8N228 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 AC025580.3-201ENST00000617932 1424 ntBASIC17.68■□□□□ 0.42
SCML4Q8N228 AC092865.6-201ENST00000642101 219 ntBASIC17.68■□□□□ 0.42
SCML4Q8N228 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.68■□□□□ 0.42
SCML4Q8N228 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCML4Q8N228 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCML4Q8N228 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.67■□□□□ 0.42
SCML4Q8N228 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.67■□□□□ 0.42
SCML4Q8N228 AC012569.1-201ENST00000591191 1524 ntBASIC17.67■□□□□ 0.42
SCML4Q8N228 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCML4Q8N228 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCML4Q8N228 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCML4Q8N228 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms