Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
XRN1Q8IZH2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
XRN1Q8IZH2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.37■■□□□ 1.33
XRN1Q8IZH2 AL355312.1-201ENST00000407115 2176 ntBASIC23.37■■□□□ 1.33
XRN1Q8IZH2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
XRN1Q8IZH2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 AC112492.5-201ENST00000421897 457 ntBASIC23.36■■□□□ 1.33
XRN1Q8IZH2 RPS2P32-201ENST00000439199 892 ntBASIC23.36■■□□□ 1.33
XRN1Q8IZH2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 AC106886.1-201ENST00000568660 600 ntBASIC23.36■■□□□ 1.33
XRN1Q8IZH2 AC008494.3-201ENST00000606615 944 ntBASIC23.36■■□□□ 1.33
XRN1Q8IZH2 AL589739.1-201ENST00000607720 493 ntBASIC23.36■■□□□ 1.33
XRN1Q8IZH2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
XRN1Q8IZH2 AL162274.1-201ENST00000617191 1098 ntBASIC23.36■■□□□ 1.33
XRN1Q8IZH2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 AC093004.1-201ENST00000508850 424 ntBASIC23.35■■□□□ 1.33
XRN1Q8IZH2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 MIR6805-201ENST00000615055 62 ntBASIC23.35■■□□□ 1.33
XRN1Q8IZH2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
XRN1Q8IZH2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 AC105021.1-202ENST00000570572 669 ntBASIC23.34■■□□□ 1.33
XRN1Q8IZH2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 AC007541.1-201ENST00000570282 1469 ntBASIC23.34■■□□□ 1.33
XRN1Q8IZH2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 AC116353.5-201ENST00000638148 1699 ntBASIC23.34■■□□□ 1.33
XRN1Q8IZH2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
XRN1Q8IZH2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 AL033527.4-201ENST00000641026 673 ntBASIC23.33■■□□□ 1.33
XRN1Q8IZH2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 GOLGA2P9-201ENST00000596977 1937 ntBASIC23.33■■□□□ 1.33
XRN1Q8IZH2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
XRN1Q8IZH2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 AC055876.2-201ENST00000531834 546 ntBASIC23.33■■□□□ 1.32
XRN1Q8IZH2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 SNX29P1-201ENST00000548357 1007 ntBASIC23.33■■□□□ 1.32
XRN1Q8IZH2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC23.33■■□□□ 1.32
XRN1Q8IZH2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC23.32■■□□□ 1.32
XRN1Q8IZH2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms