Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 AC073439.1-201ENST00000624121 1774 ntBASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 AL021920.2-201ENST00000624828 1351 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 HLA-H-201ENST00000383620 1096 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 ZNF890P-202ENST00000530367 1156 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 AC124947.2-201ENST00000547118 1133 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 SNX33P1-201ENST00000592116 1762 ntBASIC15.86■□□□□ 0.13
COL27A1Q8IZC6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 KRT18P34-201ENST00000488218 1270 ntBASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 AL512361.1-201ENST00000554200 418 ntBASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 AC021097.1-201ENST00000607902 574 ntBASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 AC003101.2-201ENST00000612557 442 ntBASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 AC087289.5-201ENST00000586076 3175 ntBASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COL27A1Q8IZC6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 SPDYE18-201ENST00000510091 1050 ntBASIC15.84■□□□□ 0.13
COL27A1Q8IZC6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms