Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC116Q8IYX3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC116Q8IYX3 FRMD8P1-201ENST00000440433 1524 ntBASIC16.14■□□□□ 0.18
CCDC116Q8IYX3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 AC124947.2-201ENST00000547118 1133 ntBASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 MTDHP4-201ENST00000600287 670 ntBASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 AC105020.1-201ENST00000435356 2205 ntBASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC116Q8IYX3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 NCF1C-201ENST00000438382 1427 ntBASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 SCARNA2-201ENST00000458748 420 ntBASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC116Q8IYX3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 EMBP1-201ENST00000458200 901 ntBASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC116Q8IYX3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms