Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 BX842568.4-201ENST00000421222 227 ntBASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 PGAM5P1-201ENST00000518923 814 ntBASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 AC034105.1-201ENST00000563488 319 ntBASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144CPQ8IYA2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 AC093525.9-201ENST00000624961 1746 ntBASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 AC016396.2-201ENST00000562575 1417 ntBASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 MIR1233-2-201ENST00000408138 82 ntBASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 MIR1233-1-201ENST00000408722 82 ntBASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 AC107918.4-202ENST00000641623 219 ntBASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 AC116353.5-201ENST00000638148 1699 ntBASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144CPQ8IYA2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 RNA5SP415-201ENST00000517246 115 ntBASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 AC140113.2-201ENST00000604370 208 ntBASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 AC027601.4-201ENST00000611259 610 ntBASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144CPQ8IYA2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 AP002414.3-201ENST00000589352 1468 ntBASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 LINC00982-205ENST00000420957 435 ntBASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC144CPQ8IYA2 Z83851.2-201ENST00000609564 659 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms