Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 ATP5G2P1-201ENST00000433580 426 ntBASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00346Q8IVM7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 MIR1224-201ENST00000408193 85 ntBASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 POM121L3P-201ENST00000419331 1163 ntBASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
LINC00346Q8IVM7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 AL020989.1-201ENST00000422979 469 ntBASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 AC124947.2-201ENST00000547118 1133 ntBASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 MIR5100-201ENST00000579544 119 ntBASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 AP000867.4-201ENST00000641616 219 ntBASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms