Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC71Q8IV32 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 SLC25A1P3-201ENST00000395415 828 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 RCN1P2-201ENST00000398357 915 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 RNA5SP419-201ENST00000515908 135 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AL671883.3-201ENST00000603274 991 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AC008608.2-201ENST00000606089 416 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 IL9RP2-201ENST00000423948 1312 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AC092053.1-201ENST00000605787 1936 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AC078925.2-201ENST00000624013 1973 ntBASIC16.07■□□□□ 0.16
CCDC71Q8IV32 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC71Q8IV32 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AC026691.1-201ENST00000602502 2017 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AL031284.1-201ENST00000419297 478 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 KRT18P67-201ENST00000432816 1264 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AF186996.4-201ENST00000467186 377 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AC113404.2-201ENST00000507884 177 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AC008687.5-201ENST00000593746 558 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 PCDHB17P-201ENST00000539533 2393 ntBASIC16.06■□□□□ 0.16
CCDC71Q8IV32 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC71Q8IV32 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC71Q8IV32 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC71Q8IV32 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC71Q8IV32 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC71Q8IV32 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC71Q8IV32 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms