Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 DFFBP1-201ENST00000433250 979 ntBASIC11.75□□□□□ -0.53
CSMD3Q7Z407 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 AL355312.1-201ENST00000407115 2176 ntBASIC11.75□□□□□ -0.53
CSMD3Q7Z407 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CSMD3Q7Z407 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AC007967.4-201ENST00000614700 386 ntBASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AL353732.1-201ENST00000569618 1459 ntBASIC11.74□□□□□ -0.53
CSMD3Q7Z407 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 FAM86MP-201ENST00000340703 885 ntBASIC11.74□□□□□ -0.53
CSMD3Q7Z407 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AL023806.1-201ENST00000603994 1649 ntBASIC11.74□□□□□ -0.53
CSMD3Q7Z407 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CSMD3Q7Z407 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 GNAQP1-201ENST00000444815 1067 ntBASIC11.73□□□□□ -0.53
CSMD3Q7Z407 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 IGHV3-52-201ENST00000519770 353 ntBASIC11.73□□□□□ -0.53
CSMD3Q7Z407 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 RAB43P1-201ENST00000561790 589 ntBASIC11.73□□□□□ -0.53
CSMD3Q7Z407 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms