Protein–RNA interactions for Protein: Q7L099

RUFY3, Protein RUFY3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3Q7L099 TUBB8P12-201ENST00000308911 1335 ntBASIC20.23■□□□□ 0.83
RUFY3Q7L099 TUBB7P-202ENST00000428444 1305 ntBASIC20.23■□□□□ 0.83
RUFY3Q7L099 TUBB8P7-204ENST00000567960 1332 ntBASIC20.23■□□□□ 0.83
RUFY3Q7L099 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
RUFY3Q7L099 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY3Q7L099 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUFY3Q7L099 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.23■□□□□ 0.83
RUFY3Q7L099 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.23■□□□□ 0.83
RUFY3Q7L099 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.22■□□□□ 0.83
RUFY3Q7L099 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 SART3-203ENST00000546611 1184 ntBASIC20.22■□□□□ 0.83
RUFY3Q7L099 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 PRELID1P1-202ENST00000567272 903 ntBASIC20.22■□□□□ 0.83
RUFY3Q7L099 REXO1L6P-202ENST00000619970 1078 ntBASIC20.22■□□□□ 0.83
RUFY3Q7L099 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUFY3Q7L099 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.22■□□□□ 0.83
RUFY3Q7L099 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 AC008608.2-201ENST00000606089 416 ntBASIC20.21■□□□□ 0.83
RUFY3Q7L099 AL589182.2-201ENST00000619332 1049 ntBASIC20.21■□□□□ 0.83
RUFY3Q7L099 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUFY3Q7L099 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RUFY3Q7L099 AC243591.1-201ENST00000452967 1364 ntBASIC20.21■□□□□ 0.83
RUFY3Q7L099 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
RUFY3Q7L099 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 AL603756.1-201ENST00000606511 2163 ntBASIC20.2■□□□□ 0.82
RUFY3Q7L099 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 AKR1C7P-201ENST00000305623 895 ntBASIC20.2■□□□□ 0.82
RUFY3Q7L099 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.2■□□□□ 0.82
RUFY3Q7L099 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RUFY3Q7L099 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms