Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 AL133373.2-201ENST00000623187 2828 ntBASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.3■□□□□ 0.68
ARHGEF16Q5VV41 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 AC140658.5-201ENST00000438532 169 ntBASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 AP000344.2-201ENST00000512987 629 ntBASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.29■□□□□ 0.68
ARHGEF16Q5VV41 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 AC012569.1-201ENST00000591191 1524 ntBASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF16Q5VV41 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 AC105339.1-204ENST00000636249 355 ntBASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 CROCCP2-202ENST00000412962 2773 ntBASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF16Q5VV41 AL353732.1-201ENST00000569618 1459 ntBASIC19.27■□□□□ 0.67
ARHGEF16Q5VV41 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ARHGEF16Q5VV41 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms