Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 AC092329.2-201ENST00000598402 547 ntBASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 Z69720.1-201ENST00000601483 472 ntBASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATPAF1Q5TC12 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 AL596257.1-201ENST00000641463 2694 ntBASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 AL138831.2-201ENST00000606564 490 ntBASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 AC125634.1-201ENST00000438758 1403 ntBASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
ATPAF1Q5TC12 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 AC026691.1-201ENST00000602502 2017 ntBASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 PCDHB17P-201ENST00000539533 2393 ntBASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.88□□□□□ -0.03
ATPAF1Q5TC12 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms