Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC93Q567U6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC93Q567U6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC93Q567U6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC93Q567U6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC93Q567U6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC93Q567U6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 WASH6P-202ENST00000359512 1437 ntBASIC20.88■□□□□ 0.93
CCDC93Q567U6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 AL662799.1-202ENST00000614205 422 ntBASIC20.88■□□□□ 0.93
CCDC93Q567U6 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.88■□□□□ 0.93
CCDC93Q567U6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC93Q567U6 REXO1L11P-201ENST00000620964 1927 ntBASIC20.88■□□□□ 0.93
CCDC93Q567U6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC93Q567U6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 PIN1P1-201ENST00000412108 996 ntBASIC20.87■□□□□ 0.93
CCDC93Q567U6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 AP000842.3-202ENST00000569238 1080 ntBASIC20.87■□□□□ 0.93
CCDC93Q567U6 AL359881.2-201ENST00000602973 570 ntBASIC20.87■□□□□ 0.93
CCDC93Q567U6 AC008267.7-201ENST00000624570 1194 ntBASIC20.87■□□□□ 0.93
CCDC93Q567U6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC93Q567U6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC93Q567U6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 MRPS18AP1-201ENST00000414458 589 ntBASIC20.86■□□□□ 0.93
CCDC93Q567U6 NME2P1-201ENST00000426182 414 ntBASIC20.86■□□□□ 0.93
CCDC93Q567U6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 AL596325.1-201ENST00000563991 1082 ntBASIC20.86■□□□□ 0.93
CCDC93Q567U6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 AC009118.2-201ENST00000613275 655 ntBASIC20.86■□□□□ 0.93
CCDC93Q567U6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC93Q567U6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC93Q567U6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC93Q567U6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC93Q567U6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC93Q567U6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC93Q567U6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC93Q567U6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms