Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 AP002469.2-201ENST00000531724 424 ntBASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 DUX4L17-201ENST00000557360 1267 ntBASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 AC104692.2-201ENST00000603054 253 ntBASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 GGTLC5P-201ENST00000617623 998 ntBASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM35AQ53FP2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AC022211.2-201ENST00000585075 2527 ntBASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AC073621.1-201ENST00000392730 636 ntBASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 HNRNPDP1-201ENST00000439535 754 ntBASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 RPS15P9-201ENST00000494093 319 ntBASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AL773604.1-201ENST00000617417 272 ntBASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 AC105020.1-201ENST00000435356 2205 ntBASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM35AQ53FP2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM35AQ53FP2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM35AQ53FP2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM35AQ53FP2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM35AQ53FP2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms