Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 AC211486.1-202ENST00000416371 468 ntBASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 MCCD1P2-201ENST00000423228 335 ntBASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 AC211476.1-201ENST00000503899 468 ntBASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 AL355385.1-201ENST00000606123 409 ntBASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC144BQ3MJ40 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 CRYGEP-201ENST00000412192 528 ntBASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC144BQ3MJ40 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 AC108073.2-201ENST00000464002 357 ntBASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 AC092865.6-201ENST00000642101 219 ntBASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 NCF1C-201ENST00000438382 1427 ntBASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC144BQ3MJ40 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC144BQ3MJ40 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC144BQ3MJ40 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms