Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 KRT18P32-201ENST00000424695 1287 ntBASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 AC025678.2-201ENST00000562061 970 ntBASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 AL353732.1-201ENST00000569618 1459 ntBASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 RNU1-129P-201ENST00000384064 167 ntBASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 AC092474.2-201ENST00000424288 719 ntBASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 FAM86C2P-203ENST00000528684 1004 ntBASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 U1.21-201ENST00000580816 167 ntBASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHROOM1Q2M3G4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 GNAS-203ENST00000306120 1878 ntBASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 NOC2LP2-201ENST00000407594 1944 ntBASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 TOP3BP1-201ENST00000420768 1380 ntBASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHROOM1Q2M3G4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 AL138688.1-201ENST00000624851 1594 ntBASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 RN7SL589P-201ENST00000481268 310 ntBASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHROOM1Q2M3G4 AC011467.4-201ENST00000594891 528 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms