Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 MIR3687-1-201ENST00000614492 61 ntBASIC19.91■□□□□ 0.78
CCDC96Q2M329 AC004877.2-201ENST00000623941 599 ntBASIC19.91■□□□□ 0.78
CCDC96Q2M329 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC96Q2M329 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC96Q2M329 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 AC016396.2-201ENST00000562575 1417 ntBASIC19.91■□□□□ 0.78
CCDC96Q2M329 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC96Q2M329 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC96Q2M329 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC96Q2M329 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 RPSAP43-201ENST00000402237 625 ntBASIC19.9■□□□□ 0.78
CCDC96Q2M329 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC96Q2M329 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC96Q2M329 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC96Q2M329 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC96Q2M329 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 EGFEM1P-202ENST00000431685 1563 ntBASIC19.89■□□□□ 0.77
CCDC96Q2M329 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 MTDHP5-201ENST00000598980 586 ntBASIC19.89■□□□□ 0.77
CCDC96Q2M329 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC96Q2M329 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC96Q2M329 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC96Q2M329 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC96Q2M329 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 AC020916.1-201ENST00000587762 1774 ntBASIC19.88■□□□□ 0.77
CCDC96Q2M329 AC093525.9-201ENST00000624961 1746 ntBASIC19.88■□□□□ 0.77
CCDC96Q2M329 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 AC112482.1-201ENST00000492080 688 ntBASIC19.88■□□□□ 0.77
CCDC96Q2M329 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 KRT19P2-202ENST00000557173 1012 ntBASIC19.88■□□□□ 0.77
CCDC96Q2M329 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC96Q2M329 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC96Q2M329 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC96Q2M329 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC96Q2M329 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC96Q2M329 AC025580.3-201ENST00000617932 1424 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms