Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.32■□□□□ 0.2
ZIC1Q15915 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.32■□□□□ 0.2
ZIC1Q15915 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.32■□□□□ 0.2
ZIC1Q15915 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.32■□□□□ 0.2
ZIC1Q15915 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.32■□□□□ 0.2
ZIC1Q15915 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC1Q15915 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC1Q15915 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ZIC1Q15915 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.32■□□□□ 0.2
ZIC1Q15915 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.32■□□□□ 0.2
ZIC1Q15915 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.32■□□□□ 0.2
ZIC1Q15915 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.32■□□□□ 0.2
ZIC1Q15915 AC002347.1-201ENST00000569543 541 ntBASIC16.32■□□□□ 0.2
ZIC1Q15915 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC1Q15915 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.32■□□□□ 0.2
ZIC1Q15915 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC1Q15915 REXO1L3P-201ENST00000622202 1288 ntBASIC16.32■□□□□ 0.2
ZIC1Q15915 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC1Q15915 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZIC1Q15915 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZIC1Q15915 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC1Q15915 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZIC1Q15915 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC1Q15915 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC1Q15915 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 BCAR1-209ENST00000546196 1340 ntBASIC16.31■□□□□ 0.2
ZIC1Q15915 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.31■□□□□ 0.2
ZIC1Q15915 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.31■□□□□ 0.2
ZIC1Q15915 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC1Q15915 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.31■□□□□ 0.2
ZIC1Q15915 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.31■□□□□ 0.2
ZIC1Q15915 KRT19P2-202ENST00000557173 1012 ntBASIC16.31■□□□□ 0.2
ZIC1Q15915 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.31■□□□□ 0.2
ZIC1Q15915 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.31■□□□□ 0.2
ZIC1Q15915 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC1Q15915 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.31■□□□□ 0.2
ZIC1Q15915 AC006538.3-201ENST00000612495 578 ntBASIC16.31■□□□□ 0.2
ZIC1Q15915 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.31■□□□□ 0.2
ZIC1Q15915 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC1Q15915 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 AC012313.1-201ENST00000593393 3059 ntBASIC16.31■□□□□ 0.2
ZIC1Q15915 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZIC1Q15915 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZIC1Q15915 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC1Q15915 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZIC1Q15915 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.3■□□□□ 0.2
ZIC1Q15915 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.3■□□□□ 0.2
ZIC1Q15915 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC1Q15915 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZIC1Q15915 AC025580.3-201ENST00000617932 1424 ntBASIC16.3■□□□□ 0.2
ZIC1Q15915 AC129492.6-201ENST00000611383 1305 ntBASIC16.3■□□□□ 0.2
ZIC1Q15915 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZIC1Q15915 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.3■□□□□ 0.2
ZIC1Q15915 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC1Q15915 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.3■□□□□ 0.2
ZIC1Q15915 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.3■□□□□ 0.2
ZIC1Q15915 AC010327.4-202ENST00000591484 748 ntBASIC16.3■□□□□ 0.2
ZIC1Q15915 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.3■□□□□ 0.2
ZIC1Q15915 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC1Q15915 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC1Q15915 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC1Q15915 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZIC1Q15915 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC1Q15915 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
ZIC1Q15915 AC092068.3-201ENST00000587894 2016 ntBASIC16.29■□□□□ 0.2
ZIC1Q15915 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.29■□□□□ 0.2
ZIC1Q15915 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC1Q15915 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms