Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-1P78426 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 AC006116.8-202ENST00000587620 1550 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 AC008894.3-201ENST00000624324 3103 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NKX6-1P78426 SPDYE21P-201ENST00000413323 827 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 LAGE3P1-201ENST00000425356 484 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-1P78426 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-1P78426 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NKX6-1P78426 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 AC109462.3-201ENST00000573934 613 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-1P78426 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.12■□□□□ 0.01
NKX6-1P78426 MIR1199-201ENST00000621445 119 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-1P78426 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-1P78426 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 AC132938.5-201ENST00000624980 1813 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-1P78426 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NKX6-1P78426 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.12■□□□□ 0.01
NKX6-1P78426 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-1P78426 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-1P78426 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 AC084018.2-201ENST00000613093 2607 ntBASIC15.11■□□□□ 0.01
NKX6-1P78426 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 METTL21AP1-201ENST00000438852 635 ntBASIC15.11■□□□□ 0.01
NKX6-1P78426 AC009947.1-201ENST00000444350 727 ntBASIC15.11■□□□□ 0.01
NKX6-1P78426 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 SNHG9-202ENST00000564014 471 ntBASIC15.11■□□□□ 0.01
NKX6-1P78426 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.11■□□□□ 0.01
NKX6-1P78426 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 REXO1L11P-201ENST00000620964 1927 ntBASIC15.11■□□□□ 0.01
NKX6-1P78426 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-1P78426 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-1P78426 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-1P78426 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.1■□□□□ 0.01
NKX6-1P78426 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
NKX6-1P78426 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NKX6-1P78426 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-1P78426 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms